Scientific glossary · Pharmacology

What are proteases and how do they break down peptides?

Proteases (or peptidases) are enzymes that cut peptide bonds. They are the main route by which the body breaks down peptides and the reason for their short natural half-life.

There are proteases in the blood, on cell surfaces, in the gut and inside cells. Some cut from the ends of the chain (exopeptidases: aminopeptidases at the N-terminus, carboxypeptidases at the C-terminus) and others cut inside it (endopeptidases), each at specific sequences.

Examples relevant to peptide research: DPP-4, which inactivates incretins and GHRH; neprilysin, which breaks down several vasoactive and natriuretic peptides; and trypsin, pepsin and chymotrypsin, which destroy peptides in the gut.

Almost all long-acting peptide engineering consists of dodging these enzymes: protecting the ends, replacing amino acids at cleavage sites, using D- or non-natural amino acids, cyclising the chain or hiding it bound to albumin.

Why it matters in peptide research

Proteases explain why the oral route is so difficult for peptides and why biological samples used to measure them must be processed quickly or with inhibitors.

Related terms

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Definition for educational and scientific purposes. It is not medical advice or a recommendation for use. NeoPeptidos products are sold labelled for research use only (RUO).